CDS

Accession Number TCMCG007C28811
gbkey CDS
Protein Id XP_009141961.1
Location join(20179789..20179896,20179991..20180025,20180130..20180205,20180287..20180365,20180448..20180626,20180702..20180776,20180853..20181006,20181077..20181281,20181424..20181504,20181639..20181755,20181865..20181916,20182050..20182205)
Gene LOC103865858
GeneID 103865858
Organism Brassica rapa

Protein

Length 438aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009143713.3
Definition polyglutamine-binding protein 1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category AK
Description WW domain-containing protein
KEGG_TC -
KEGG_Module M00353        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12865        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000380        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002218        [VIEW IN EMBL-EBI]
GO:0002230        [VIEW IN EMBL-EBI]
GO:0002252        [VIEW IN EMBL-EBI]
GO:0002253        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0002697        [VIEW IN EMBL-EBI]
GO:0002831        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030182        [VIEW IN EMBL-EBI]
GO:0031175        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032101        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043330        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048666        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050688        [VIEW IN EMBL-EBI]
GO:0050691        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051607        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071360        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0120036        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAGAAGAGCTTCAACAACACCACAACAATTCATCTACTTATGGCTATGGAAGCTCATCGCTAGACATTGAATCTGCTGCTAGTAACGCTCTTCTTCACGAACAAGAGATTGAAACGCAGAAGATCATACAAGGTCAAAGAGAGGCTGGAGCTTCAGTAGATGGAGAAAGTAACACTGACATTCTTCGGCAACGTGCTGACCCCAATGCTCTTAAGGAACATTTGCTGAAGTTCACTGCACATCACCGTGCAGAAACAGCATCAAAGCGTGGGAGTGTGAGTACTTGCGGAGAAGGTAATGTGGATGTTGGGAATGGTTATGGTATACCGGGAGGAGTTGCGTACGCAGGCCACTCCGAGATCAGTGAGAAGCCTGAACCTACTGATTATCTGCCTGAATATCTCAAACATAAATTAAAAGCCAGGGGGATTCTTAGAGATGGTTCTGGTGCTGTTACATCCAACGCTCATGATGCGTCAGCGGGTAGTTGGAATAGACAGACAAGTGTGCCTTTTCAGACAAATGCAAACACATTGCCATTGGGATGGGTAGATGCGAAAGATCCTGCTACTGGCGCTACATATTACTATAACCAGCATACCGGGGCAACCCAGTGGGAAAGGCCTCTTGAGCTACCTTCAAGCGCGCCGCTACCGATGCCTCCTAAAGAAGAGTGGATTGAAACACTTGATGAAACATCTGGTCATAAGTATTACTACAATACAAAGACACATGTATCGCAATGGGAGCCTCCAGCTTCTTTAAAGAAGCCCTCTGCCACAAACACTAACAACACTGCTAATGGGAAGAGGGAGCTTCCGCCCTCTCAGATGCCAAGATGCAGCGGATGTGGTGGCTGGGGAGTGGGCCTTGTCCAGAGCTGGGGTTACTGTGCTCACTGTACCAGAGTTTGCAATCTCCCAGAGCAGCAGTACTTGGCATACGTCACAAATGCAAGAAACTCTGGCCAAACCGATCCAAATCAGAGGTCAAGTTCAAAGCCTCCGGTGAAAAAGGGAGTAGGCAAAAAACGTGCGCATGCGGAGGATGATGAGGTTGACCCAATGGACCCAAGCTCGTACTCAGATGCTCCACGTGGTGGCTGGGTTGTCGGACTGAAAGGAATGCAACCTCGAGCTGCTGATACAACTGCCACGGGTCCTTTGTTTCAACAGAGACCGTATCCATCACCTGGAGCTGTTCTGAGGAGAAACGCAGAGACGGCATCATCGCAGAAGAAGAAACCAGGCTCTCATTTCACTGAAATCACAAAGAGAGGCGATGGGAAAGATGGTCTTGGTGATGCAGATTGA
Protein:  
MGEELQQHHNNSSTYGYGSSSLDIESAASNALLHEQEIETQKIIQGQREAGASVDGESNTDILRQRADPNALKEHLLKFTAHHRAETASKRGSVSTCGEGNVDVGNGYGIPGGVAYAGHSEISEKPEPTDYLPEYLKHKLKARGILRDGSGAVTSNAHDASAGSWNRQTSVPFQTNANTLPLGWVDAKDPATGATYYYNQHTGATQWERPLELPSSAPLPMPPKEEWIETLDETSGHKYYYNTKTHVSQWEPPASLKKPSATNTNNTANGKRELPPSQMPRCSGCGGWGVGLVQSWGYCAHCTRVCNLPEQQYLAYVTNARNSGQTDPNQRSSSKPPVKKGVGKKRAHAEDDEVDPMDPSSYSDAPRGGWVVGLKGMQPRAADTTATGPLFQQRPYPSPGAVLRRNAETASSQKKKPGSHFTEITKRGDGKDGLGDAD